BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029E07LP1|AL429071
(875 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1074 1726 0.0
>3x_Contig1074
Length = 4572
Score = 1726 bits (870), Expect = 0.0
Identities = 873/875 (99%)
Strand = Plus / Minus
Query: 1 aaacacaatatcacgtgatatatcacgtgatantgaattattgtggttttgtaagacttt 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1312 aaacacaatatcacgtgatatatcacgtgatattgaattattgtggttttgtaagacttt 1253
Query: 61 tgctctggtttccgttgacctttagtggtcacgtggtggttattgaaagacagagataat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1252 tgctctggtttccgttgacctttagtggtcacgtggtggttattgaaagacagagataat 1193
Query: 121 aatttgacgttagaagaggcgaggctgtcactagtgaaccctggataaagggtatacgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1192 aatttgacgttagaagaggcgaggctgtcactagtgaaccctggataaagggtatacgag 1133
Query: 181 attgtagggaacttacagcgagttttagagcatggttaaggccaggcgttactgggttga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 attgtagggaacttacagcgagttttagagcatggttaaggccaggcgttactgggttga 1073
Query: 241 ttagatagctagatcaagaagttatacaaattgaaatgccttagtaaggcggacaacact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1072 ttagatagctagatcaagaagttatacaaattgaaatgccttagtaaggcggacaacact 1013
Query: 301 aatgctaccttattcgctgaaaaccgtatctagtattctacgaaagatccaagatggagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 aatgctaccttattcgctgaaaaccgtatctagtattctacgaaagatccaagatggagt 953
Query: 361 atagtaggaaaaatatgcatatagtttggcctttcctggggtgtaacgactcttagggtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 952 atagtaggaaaaatatgcatatagtttggcctttcctggggtgtaacgactcttagggtt 893
Query: 421 ttcggttttgataactttcaacacttctttggcaatgacttctggctcatcagaattttc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892 ttcggttttgataactttcaacacttctttggcaatgacttctggctcatcagaattttc 833
Query: 481 gaggctttgcttgagcattctttccgacactttacccttgattgaatcatatacggccat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 832 gaggctttgcttgagcattctttccgacactttacccttgattgaatcatatacggccat 773
Query: 541 ttcttcatctgcaggagaatttgaattagccatacctgttttgataatatgtggatctat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 ttcttcatctgcaggagaatttgaattagccatacctgttttgataatatgtggatctat 713
Query: 601 agtactgacgtgaattccgaactttttcacctcgtaatcaagagactcagtgtacccttc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 agtactgacgtgaattccgaactttttcacctcgtaatcaagagactcagtgtacccttc 653
Query: 661 taaagcatgtttagacgaacagtaaagagcaccgtatgggattggcataataccacccat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 taaagcatgtttagacgaacagtaaagagcaccgtatgggattggcataataccacccat 593
Query: 721 tgaacttatattgattatkttaccgtgtctttgctctctcatatgaggtaacacagcacg 780
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 tgaacttatattgattattttaccgtgtctttgctctctcatatgaggtaacacagcacg 533
Query: 781 ggtcatccgatggacaccaaagaaattcgtttcgaaaatggtttttgctagatcagttga 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 ggtcatccgatggacaccaaagaaattcgtttcgaaaatggtttttgctagatcagttga 473
Query: 841 acattcttctactgctgcccatttaaacgcaatgc 875
|||||||||||||||||||||||||||||||||||
Sbjct: 472 acattcttctactgctgcccatttaaacgcaatgc 438
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6056
Number of Sequences: 1807
Number of extensions: 6056
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 1
length of query: 875
length of database: 10,358,551
effective HSP length: 16
effective length of query: 859
effective length of database: 10,329,639
effective search space: 8873159901
effective search space used: 8873159901
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)